probes: 22

The exact question asked of a corpus, kept verbatim (code column): a Python regex on one document, a SPARQL query on a public endpoint, a shell request. result_count/result_of is the re-run figure on result_date; matches_excerpt says whether that figure is the one quoted in the observation (0 = differs, both kept).

This data as json

id	form_id	form_name	file	kind	corpus_id	written	run	result_count	result_of	result_date	matches_excerpt	note	code
22	form-070	Bibliographic references	probes/2026-08/line-070.py	python	corpus-europe-pmc-jats-2023-2026	2026-08-08	python3 tools/run_probe.py probes/2026-08/line-070.py <dir with the 272 .xml>	251	272	2026-09-09	1		"""Fault Atlas probe — catalogue line 70 (form-070). Question: does the document carry a final reference block, and citation calls in its body? Rewritten 2026-09-09 as a standalone probe from the August 2026 campaign script (the original was an inline loop, one counter per line, same regexes). A probe answers one question on one JATS XML file: "is this fault here, and where?" It repairs nothing and decides nothing. Returns a list of excerpts, empty if absent. Run on the reproducible corpus (see corpora/europe-pmc-jats-2023-2026-272.json): python3 tools/run_probe.py probes/2026-08/line-070.py <dir with the 272 .xml> Result (re-run 2026-09-09): 251/272 carry a final <ref> block (10,912 references, median 36, max 450); 247/272 carry <xref ref-type="bibr"> calls (17,210); 13/272 carry an author-year citation in the running text. Same figures as the excerpt. A carrier here is a document with a reference block. """ import re, collections SONDES = {} def sonde(ligne, nom): def deco(f): SONDES[ligne] = (nom, f); return f return deco def corps(x): m = re.search(r'(?s)<body\b.?</body>', x) return m.group(0) if m else '' def txt(x): return re.sub(r'\s+', ' ', re.sub(r'<[^>]+>', ' ', x)) CIT_LIGNE = re.compile(r'\((?:[A-Z][A-Za-z\'’-]+(?: et al\.?\| and [A-Z][A-Za-z-]+)?,? ' r'(?:19\|20)\d\d[a-z]?)\)') @sonde(70, "bibliographic references: final block, xref calls, inline author-year") def d70(x): nref = len(re.findall(r'<ref\b', x)) nxref = len(re.findall(r'<xref[^>]ref-type="bibr"', x)) ninline = len(CIT_LIGNE.findall(txt(corps(x) or x))) if not nref: return [] return [f"ref x{nref}", f"xref bibr x{nxref}"] + ([f"inline author-year x{ninline}"] if ninline else [])