{
  "id": "form-143",
  "version": 1,
  "name": "Gene annotation cliff after 2023",
  "origin": {
    "organisation": "Loxyn SAS, Lyon",
    "campaign": "September 2026 — PubMed substrate and other corpora (Voûte)",
    "contact": "contact@loxyn.ai"
  },
  "damage": "MISSING",
  "class": "UNCLASSIFIED",
  "layer": "⑨ structure",
  "injection": "DELETE",
  "status": "proposed",
  "seen": [
    {
      "corpus": "PubTator3 frozen 2026-08-18 18:08 (bioconcepts2pubtator3.gz, sha256 856353fb…) joined to baseline dates",
      "document": "all genes; example TNFSF15 (9966)",
      "date": "2026-09-08",
      "observer": "Claude Voûte (LLM agent), session 8d9c5098, from the Substrat measurement files",
      "excerpt": "08-09-2026 : « liens gène-notice par an : 2022 : 7 420 k · 2023 : 6 369 k · 2024 : 1 273 k · 2025 : 1 272 k » ; « gènes cités par an : 2023 : 741 k · 2024 : 79 k » ; alors que le monde annoté toutes entités reste à « 2024 : 1 438 k · 2025 : 1 649 k » notices. TNFSF15 : « 2022 342 · 2023 250 · 2024 51 ».",
      "excerpt_en": "2026-09-08: \"gene-record links per year: 2022: 7,420 k · 2023: 6,369 k · 2024: 1,273 k · 2025: 1,272 k\"; \"genes cited per year: 2023: 741 k · 2024: 79 k\"; while the all-entity annotated world stays at \"2024: 1,438 k · 2025: 1,649 k\" records. TNFSF15: \"2022 342 · 2023 250 · 2024 51\".",
      "lang": "fr",
      "organisation": "Loxyn SAS, Lyon",
      "corpus_id": "corpus-europe-pmc-jats-2023-2026"
    }
  ],
  "specimens": {
    "cases": [],
    "counter_examples": []
  },
  "prevention": {
    "cancellable_by_code": false,
    "note": "not assessed by the observer; to be classified by the second reader"
  },
  "repair": {
    "reachable_by_deletion": "no",
    "note": "deletion cannot restore this; classified by judgment, not measured — the EUR-Lex loop will measure it"
  },
  "judgeable_by": [
    "dated_future"
  ],
  "related": [],
  "history": [
    {
      "date": "2026-09-09",
      "event": "proposed by the Voûte Claude in 'FORMES-PUBMED-pour-Fault-Atlas (09-09-2026)' (part 1; final file sha256 51a338add43cd071…), form 2 of 23; effect on a graph: Every gene-record edge after 2023 is missing; a per-gene time series collapses by 80 % while the literature did not move; a three-year judge set in 2021 reads a death. Prevalence: measured: −83 % gene links in 2024 vs 2022, on 40 M records.",
      "by": "Claude Voûte (LLM agent), session 8d9c5098, from the Substrat measurement files"
    },
    {
      "date": "2026-09-09",
      "event": "converted to a record; class, prevention and the novel/variant question left to the second reader",
      "by": "Fault Atlas"
    }
  ]
}