forms: form-142
Data license: CC BY-SA 4.0 (records) · Apache 2.0 (tools) · Data source: Loxyn-Korela/fault-atlas
This data as json
| id | name | damage | class | injection | layer | status | organisation | campaign | cancellable_by_code | reachable_by_deletion | judgeable_by | observations | observed_absent_in | name_fr | legacy_line | version | record |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| form-142 | Species-split gene identities | SPLIT | UNCLASSIFIED | RENAME | ⑥ resolution | proposed | Loxyn SAS, Lyon | September 2026 — PubMed substrate and other corpora (Voûte) | 0 | no | curated, registry | 1 | 1 | {"id": "form-142", "version": 1, "name": "Species-split gene identities", "origin": {"organisation": "Loxyn SAS, Lyon", "campaign": "September 2026 — PubMed substrate and other corpora (Voûte)", "contact": "contact@loxyn.ai"}, "damage": "SPLIT", "class": "UNCLASSIFIED", "layer": "⑥ resolution", "injection": "RENAME", "status": "proposed", "seen": [{"corpus": "PubTator3 frozen 2026-08-18 18:08 (bioconcepts2pubtator3.gz, sha256 856353fb…)", "document": "Gene 9966 (TNFSF15 human) vs 326623 (Tnfsf15 mouse); PD-L1: 29126, 60533, 574058; PD-1: 5133, 18566; TMPRSS2: 7113, 50528; ACE2: 59272, 70008, 103231639", "date": "2026-09-07", "observer": "Claude Voûte (LLM agent), session 8d9c5098, from the Substrat measurement files", "excerpt": "07-09-2026, table gène × mois (4 929 431 gènes vivants) : « TNFSF15 humain (TL1A) rang 5 715 · Tnfsf15 souris rang 18 396 » à la même photo ; liste de juin 2021 : « 2. ACE2 gène 59272 · 15. ACE2 gène 70008 · 24. ACE2 gène 103231639 » ; « 1. PD-L1 29126 · 3. PD-L1 60533 · 4. PD-L1 574058 » (juin 2018). Réveil des vieux : « 62 places de champions = 32 noms distincts » (08-09-2026), le compte en places étant gonflé par les doublons d'espèce.", "excerpt_en": "2026-09-07, gene × month table (4,929,431 living genes): \"TNFSF15 human (TL1A) rank 5,715 · Tnfsf15 mouse rank 18,396\" in the same snapshot; June 2021 list: \"2. ACE2 gene 59272 · 15. ACE2 gene 70008 · 24. ACE2 gene 103231639\"; \"1. PD-L1 29126 · 3. PD-L1 60533 · 4. PD-L1 574058\" (June 2018). Old-gene revival: \"62 champion places = 32 distinct names\" (2026-09-08), the count in places being inflated by species duplicates.", "lang": "fr", "organisation": "Loxyn SAS, Lyon", "corpus_id": "corpus-europe-pmc-jats-2023-2026"}], "specimens": {"cases": [], "counter_examples": []}, "prevention": {"cancellable_by_code": false, "note": "not assessed by the observer; to be classified by the second reader"}, "repair": {"reachable_by_deletion": "no", "note": "deletion cannot restore this; classified by judgment, not measured — the EUR-Lex loop will measure it"}, "judgeable_by": ["curated", "registry"], "related": ["form-026", "form-086"], "history": [{"date": "2026-09-09", "event": "proposed by the Voûte Claude in 'FORMES-PUBMED-pour-Fault-Atlas (09-09-2026)' (part 1; final file sha256 51a338add43cd071…), form 1 of 23; effect on a graph: One biological object (the protein, the target) becomes two to four nodes depending on the species studied; counts and degrees split between them; a blind reunion by surface name would merge orthologues that are not the same entity. Prevalence: seen, not counted globally; 3 species duplicates on 20 places of a gene list (June 2018).", "by": "Claude Voûte (LLM agent), session 8d9c5098, from the Substrat measurement files"}, {"date": "2026-09-09", "event": "converted to a record; class, prevention and the novel/variant question left to the second reader", "by": "Fault Atlas"}]} |